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MetaNetX
Automated Model Construction and Genome Annotation for Large-Scale Metabolic Networks
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SystemsX.ch
The Swiss Initiative in Systems Biology
My Selection
Summary
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Import model
Upload reactions
Delete models
Upload genome
Revived!
Analyze
Flux balance (FBA)
Groups of coupled reactions (GCR)
Blocked reactions (BLO)
Reaction knockout (RKO)
Gene/peptide knockout (PKO)
Align mnet
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Create / Modify
Combine logically
Split and merge
Growth recovery (GRE)
Build from a genome (BUILD)
Revived!
Inspect chem
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Utilities
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Getting started
A short tutorial
Model internals
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**This is a beta version of MetaNetX/MNXref, MNXref identifiers may not be final**
Reactions with MNXM1091013
Add selected reac/enzy to a model in my sandbow, or create a new one
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#reac
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MNXref ID
Enzy
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MNXref ID
Enzy
1
holo-[(phenol)carboxyphthiodiolenone synthase]
+
1
ATP
+
1
eicosanoate
generic compartment 1
<=>
1
icosanoyl-[(phenol)carboxyphthiodiolenone synthase]
+
1
diphosphate
+
1
AMP
generic compartment 1
MNXR194050
FAA26_MYCBO
FAA26_MYCMM
FAA26_MYCTU
-- Select --
FAA26_MYCBO
FAA26_MYCMM
FAA26_MYCTU
5
NADPH
+
1
icosanoyl-[(phenol)carboxyphthiodiolenone synthase]
+
3
malonyl-CoA
+
2
(S)-methylmalonyl-CoA
generic compartment 1
<=>
1
C32-carboxyphthiodiolenone-[(phenol)carboxyphthiodiolenone synthase]
+
5
CoA
+
5
NADP(+)
+
5
CO2
+
2
H2O
generic compartment 1
MNXR170983
PPSA_MYCBO
PPSB_MYCBO
PPSC_MYCBO
PPSD_MYCBO
PPSE_MYCBO
PPSA_MYCTU
PPSB_MYCTU
PPSC_MYCTU
PPSD_MYCTU
PPSE_MYCTU
-- Select --
PPSA_MYCBO
PPSB_MYCBO
PPSC_MYCBO
PPSD_MYCBO
PPSE_MYCBO
PPSA_MYCTU
PPSB_MYCTU
PPSC_MYCTU
PPSD_MYCTU
PPSE_MYCTU
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